rs34576160 chr6:151387412 G>A

Sequence
aggccataacaacttagtattact[G/A]tgacaacagttttgacttcattga
ASB for transcription factors
RFX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN -1.18 2.07 1.000.02 1.00 3.89 Concordant
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Motif analysis

RFX1_HUMAN Concordant
RFX1_HUMAN pic

Genetic associations

GRASP breast cancer
GTEx eQTL Adipose_Subcutaneous,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid

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