rs34582191 chr17:1488503 C>T

Sequence
ttcttgggttactcctttcagtga[C/T]gccagccaagccgtgaggtccgta
ASB in cell types
BEAS-2B (bronchial epithelium) HEK293 (embryonic kidney)
ASB for transcription factors
GCR_HUMAN ZN394_HUMAN ZBT20_HUMAN ZN189_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.32 1.60 1.006.4·10-7 1.00 n/a No Hit
ZN394_HUMAN 2.58 n/a 1.2·10-31.00 2.00 n/a No Hit
ZBT20_HUMAN 1.74 n/a 0.021.00 2.00 n/a No Hit
ZN189_HUMAN 2.56 -4.79 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI lung function (fvc)
GTEx eQTL Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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