rs34584592 chr8:73878927 G>C
- Sequence
tcaacatcccgggcgcgggggcgg[G/C]gtctgcgatgggaaggggatggag
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) monocytes from periferal blood MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- SPT5H_HUMAN MYC_HUMAN SRBP2_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | 0.47 | 1.59 | 1.40 | n/a | n/a | |||
| MYC_HUMAN | n/a | 3.19 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.18 | -0.63 | 2.67 | n/a | No Hit | |||
| CREB1_HUMAN | 0.09 | 1.73 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Muscle_Skeletal, Nerve_Tibial