rs34598243 chr3:18127348 T>C
- Sequence
tagctcttcaccaacgaaggcaaa[T/C]gtagagctacagcaggacctactg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- CTCF_HUMAN SMCA5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 3.02 | 1.40 | n/a | No Hit | |||
| SMCA5_HUMAN | -2.02 | 2.46 | 1.00 | n/a | n/a |
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