rs34601537 chr16:13436247 G>A
- Sequence
accctgctagtaaaaaagggtgtc[G/A]taaagaaaccagccaaaacctacc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- COT1_HUMAN IKZF1_HUMAN MEF2B_HUMAN NR2C1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -4.29 | 4.18 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.70 | 1.95 | 1.25 | n/a | n/a | |||
| MEF2B_HUMAN | -2.11 | 2.60 | 1.00 | n/a | No Hit | |||
| NR2C1_HUMAN | -2.24 | 2.60 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4