rs34602589 chr20:45140093 T>A

Sequence
catatctggtacagcagctgcaat[T/A]ggcgtcaccacttggttaagctta
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 2.62 -3.98 5.7·10-51.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI parental longevity (mothers age at death)
GTEx eQTL Artery_Tibial,  Brain_Putamen_basal_ganglia,  Colon_Transverse,  Esophagus_Mucosa,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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