rs34648 chr5:72816594 T>C
- Sequence
gttgccaaggcgaccgccgccgaa[T/C]gttcccgccgcgggctccgccccc
- ASB in cell types
- 22RV1 (prostate carcinoma) thymus-derived CD34- cells
- ASB for transcription factors
- ANDR_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -5.01 | 3.46 | 2.50 | -4.21 | Discordant | |||
| BC11B_HUMAN | n/a | 2.61 | 2.50 | n/a | n/a |
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Motif analysis
