rs348286 chr20:49186756 C>T

Sequence
tttttacctcaacaagtagcaatg[C/T]aatttacacttggtaagcacggat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ZN687_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN687_HUMAN 2.38 n/a 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  obesity with early age of onset (age >2),  total cholesterol change with statins,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Pancreas,  Testis,  Thyroid,  Whole_Blood

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