rs348291 chr20:49188683 G>C

Sequence
ccacttcctttttccttccttgct[G/C]tcgcttcttcctcttgtcctgcct
ASB in cell types
HepG2 (hepatoblastoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma) 0.79 0.71 6.6·10-40.48 1.11
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  obesity with early age of onset (age >2),  total cholesterol change with statins,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Pancreas,  Testis,  Thyroid,  Whole_Blood

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