rs349443 chr1:41811725 G>T
- Sequence
ggggaaaggcgaaacgtcaggaga[G/T]ggtgagaaatgggaatttggaggc
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line) GM12890 (Lymphoblastoid Cell Lines)
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM18526 (B – cells Lymphoblastoid Cell Lines) | -1.39 | 2.77 | 1.00 | |||
| GM12891 (male B- cells lymphoblastoid cell line) | 1.37 | -1.38 | 1.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.87 | 0.70 | 1.04 | |||
| GM12890 (Lymphoblastoid Cell Lines) | -0.98 | 1.38 | 1.00 |
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