rs35078 chr12:30989915 G>A
- Sequence
gcagctgccagaagatagcaccag[G/A]caccatgtggctgggcctccaagc
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) KMS-11 (Plasma cell myeloma) TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -3.54 | 2.34 | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.50 | 1.56 | 1.33 | 0.29 | Weak Concordant |
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Motif analysis
