rs35155825 chr16:1983660 C>A
- Sequence
agggaggggacaagagcccaggac[C/A]ctagcgcgcgccgcaatctgtgcg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NRF1_HUMAN RFX1_HUMAN PF21A_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -3.03 | 1.76 | 2.00 | n/a | No Hit | |||
| RFX1_HUMAN | n/a | 0.48 | 2.50 | n/a | No Hit | |||
| PF21A_HUMAN | n/a | 2.69 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.70 | 1.50 | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | 0.39 | 1.44 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_EBV-transformed_lymphocytes, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pituitary, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood