rs352347 chr5:149345636 A>G

Sequence
agcaagtaagcattgcaggcgggg[A/G]gtcgggagcgtgaggactctgagg
ASB in cell types
K562 (myelogenous leukemia) primary B-CLL cells brain prefrontal cortex region tissues
ASB for transcription factors
OLIG2_HUMAN BRD2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OLIG2_HUMAN 0.30 2.22 1.009.7·10-3 1.00 n/a No Hit
BRD2_HUMAN 1.21 -0.14 0.011.00 1.60 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Brain_Frontal_Cortex_BA9,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid,  Whole_Blood

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