rs353570 chr11:35129794 A>C

Sequence
acccaaaacacagaaagataaatt[A/C]atctgaaaggcagaatgaaagata
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
DUX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN 1.94 -1.62 0.051.00 1.00 -3.55 Concordant
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Motif analysis

DUX4_HUMAN Concordant
DUX4_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  fasting blood glucose,  mitral annular calcium
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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