rs353633 chr11:35163941 A>G

Sequence
ctctctcagcctcagttttcttat[A/G]tgtatcaagtttcaatgatcgcaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SMC1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC1A_HUMAN -0.37 2.18 1.000.04 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  ldl cholesterol change with statins,  mitral annular calcium,  tardive dyskinesia,  total cholesterol
GTEx eQTL Artery_Tibial,  Skin_Not_Sun_Exposed_Suprapubic

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