rs354271 chr9:95721378 C>T
- Sequence
ctcattcaatttagtcgcaataac[C/T]ttattggcatgacaaggctggcaa
- ASB in cell types
- primary prostate cancer
- ASB for transcription factors
- ZBT40_HUMAN CTCF_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT40_HUMAN | n/a | 2.45 | 2.00 | 3.39 | Concordant | |||
| CTCF_HUMAN | 2.06 | 0.62 | 1.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.66 | -0.24 | 1.73 | 1.02 | Weak Discordant |
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Motif analysis
