rs355824 chr2:164843369 T>C

Sequence
gttttagtctttaaacaataactc[T/C]gtttaaacaatttcatgaatcatt
ASB for transcription factors
FOXA2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 2.71 -1.91 0.021.00 2.00 -0.95 Weak Concordant
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Motif analysis

FOXA2_HUMAN Weak Concordant
FOXA2_HUMAN pic

Genetic associations

GRASP recurrent early onset major depressive disorder,  recurrent early onset major depressive disorder (males),  spine bone mineral density (bmd),  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas

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