rs356026 chr5:14281806 A>C

Sequence
ggatgtgtgagagaaaactcggcc[A/C]taatatgggctggctagatagtaa
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN ARI1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -0.66 2.14 1.006.6·10-3 1.00 n/a n/a
ARI1B_HUMAN -2.02 2.42 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  college completion,  years of education
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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