rs357044 chr1:180270338 C>T
- Sequence
aagtcaggaatgtcacagagacac[C/T]ttctggggcacacaggtgagcaag
- ASB in cell types
- LNCaP (prostate carcinoma) GM02255 (Lymphoblastoid Cell Lines) LNCaP C4-2B (prostate carcinoma) HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.93 | 0.67 | 1.20 | -3.42 | Concordant |
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Motif analysis
