rs357729 chr2:71154810 A>T

Sequence
ttcattaaatgttggacacctatg[A/T]acttcatggactcttctgcagcct
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12890 (Lymphoblastoid Cell Lines) 2.29 -0.71 1.9·10-31.00 1.00
GM18486 (Lymphoblastoid Cell Lines) -0.65 1.45 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  years of education
GTEx eQTL Muscle_Skeletal,  Testis

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