rs358505 chr5:39102834 C>G
- Sequence
actttaggagaatgtacatatagc[C/G]tactgttttcctggagagaacaga
- ASB in cell types
- A549 (lung carcinoma) LHSAR (prostate epithelial cells) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- ANDR_HUMAN CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.50 | 1.42 | 1.80 | 0.40 | Weak Concordant | |||
| CEBPB_HUMAN | 1.59 | 0.01 | 1.82 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
