rs35894 chr3:29551916 C>G
- Sequence
tttgccttcccattccctgctgca[C/G]acgcagtacctgctgaacctaatg
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.42 | 0.47 | 1.62 | -3.76 | Concordant | |||
| FOXA1_HUMAN | 1.81 | -1.34 | 1.50 | n/a | No Hit |
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Motif analysis
