rs359430 chr5:173860894 C>A

Sequence
acaacaaccctctctcctcgctgc[C/A]ctacagatctgggttccccggctt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NCOR1_HUMAN HTF4_HUMAN NFIC_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NCOR1_HUMAN n/a 2.80 1.003.2·10-4 2.00 n/a n/a
HTF4_HUMAN -1.30 1.89 1.007.2·10-3 2.00 n/a No Hit
NFIC_HUMAN n/a 2.19 1.007.5·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease

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