rs359685 chr2:126359697 T>C
- Sequence
tttgttaagattagaattgctata[T/C]gtgaaggatccagcagagggctag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM17942 (lymphoblastoid cell) GM19240 (B cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.02 | 1.88 | 1.42 | n/a | No Hit | |||
| STAG1_HUMAN | 0.80 | 1.52 | 1.56 | n/a | n/a | |||
| RAD21_HUMAN | -0.40 | 2.15 | 1.17 | n/a | n/a |
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