rs35989529 chr12:120291913 C>T
- Sequence
ccactgcgcaaagctggaaaggtt[C/T]tgttcgcgccccgctcccccacgg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney) HepG2 (hepatoblastoma)
- ASB for transcription factors
- GCR_HUMAN CBX1_HUMAN NRF1_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.75 | 0.38 | 1.14 | n/a | No Hit | |||
| CBX1_HUMAN | 3.36 | n/a | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 2.07 | -0.25 | 1.67 | n/a | No Hit | |||
| STAT1_HUMAN | -0.82 | 1.38 | 3.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.13 | -0.39 | 1.44 | n/a | No Hit |
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