rs360529 chr20:13009716 T>C

Sequence
gttccaactctttgcatatatttt[T/C]gtccaagagacctgctacaaccgt
ASB in cell types
MDM(monocyte derived macrophages) 22RV1 (prostate carcinoma)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.27 0.40 2.6·10-120.91 1.40 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  bipolar disorder in alcoholics,  ldl cholesterol
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung

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