rs362564 chr20:10263978 T>C

Sequence
gctcctaagtaaacaatcaggaac[T/C]gttgcataatacaaaccacagggc
ASB in cell types
HepG2 (hepatoblastoma) LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.14 -0.17 0.031.00 1.67 -1.06 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GRASP age at death with kuru exposure,  neuroblastoma (brain cancer),  systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta,  Artery_Tibial

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