rs365769 chr19:43934947 T>G
- Sequence
cccaacgttacaccgctaggaagc[T/G]acagagctgtgggaggtgggggaa
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.96 | 2.92 | 1.11 | 2.88 | Concordant |
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Motif analysis
