rs365819 chr20:46406389 G>A

Sequence
cgccacccctcgggggcctgacga[G/A]ccggcgcggtccagcccaggcccg
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney)
ASB for transcription factors
REST_HUMAN VEZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN 0.38 3.19 0.821.6·10-5 2.00 n/a No Hit
VEZF1_HUMAN -1.12 2.10 1.000.01 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Heart_Atrial_Appendage,  Nerve_Tibial,  Thyroid

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