rs36669 chr5:36745565 T>C

Sequence
cacagtactcaggggccagccagg[T/C]gccatcccaggtggcccagcttgg
ASB in cell types
22RV1 (prostate carcinoma) T47D (invasive ductal carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) -1.98 2.53 1.003.5·10-3 2.00
T47D (invasive ductal carcinoma) 0.59 1.26 1.000.02 1.83
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  fasting insulin,  hdl cholesterol,  hdl cholesterol change with statins,  obesity with early age of onset (age >2),  years of education
GTEx eQTL Adipose_Subcutaneous,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Whole_Blood

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