rs36671 chr5:36744842 C>G
- Sequence
ccagcccggcgtcccagttccagc[C/G]gcgctgcaggggcgcgagggtgcc
- ASB in cell types
- T47D (invasive ductal carcinoma) HCASMC (Human coronary artery smooth muscle cells) breast tumor
- ASB for transcription factors
- TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | -4.71 | 2.29 | 2.00 | -0.78 | Weak Discordant |
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Motif analysis
