rs367035 chr11:2902596 A>G
- Sequence
tgggttcggtacctcggggctcag[A/G]tgtgcagtcagctgttaatgtggc
- ASB in cell types
- THP-1 (acute monocytic leukemia) MDM(monocyte derived macrophages) CD14+ monocytes CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN MTG8_HUMAN STAT1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.64 | 0.37 | 1.35 | n/a | No Hit | |||
| MTG8_HUMAN | 1.50 | -0.08 | 1.17 | n/a | n/a | |||
| STAT1_HUMAN | 2.00 | -1.40 | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.33 | -0.27 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, comorbid depressive syndrome and alcohol dependence, hypertension (early onset hypertension), microalbuminuria, neuroblastoma (brain cancer), serum creatinine, tetrology of fallot, total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid, Uterus, Whole_Blood