rs367539 chr17:77354790 C>T

Sequence
acagacagtggagggcggtgcaat[C/T]gtgacgcctgcttgttgcactttg
ASB in cell types
adrenal gland
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.85 0.26 0.021.00 1.17 0.40 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP age at death with kuru exposure,  autism,  college completion,  myocardial infarction (mi),  primary rhegmatogenous retinal detachment
GTEx eQTL Brain_Cerebellar_Hemisphere,  Esophagus_Muscularis

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