rs3738067 chr1:28736724 G>A
- Sequence
tgggggcggggaggccgtgagcac[G/A]gcttccgctcctccaatccgccag
- ASB in cell types
- CUTLL1 (T-cell lymphoblastic lymphoma 1) neutrophils from periferal blood erythroid progenitors GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- UBP7_HUMAN RAD21_HUMAN XRCC5_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| UBP7_HUMAN | 4.03 | -4.37 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.19 | 3.04 | 1.48 | n/a | n/a | |||
| XRCC5_HUMAN | 1.72 | -0.85 | 1.17 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), diastolic blood pressure (dbp), obesity with early age of onset (age >2), systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Whole_Blood