rs3739998 chr10:30027143 C>G
- Sequence
ctgaaagcactggtgattttcgga[C/G]tttcctggggctccctaggttcag
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia) ALL-SIL (acute lymphoblastic leukemia) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN TLX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.53 | 1.74 | 1.40 | n/a | No Hit | |||
| TLX1_HUMAN | -2.34 | 2.45 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2