rs374011 chr14:45867616 A>G

Sequence
taggtgacatttttggggtagcta[A/G]gatttctctatggcagtcacagtg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SMCA5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA5_HUMAN 2.74 n/a 0.011.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  lp-pla2 activity
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia

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