rs3741162 chr11:72380184 T>C

Sequence
cagaggtaaagaacatgcaggctg[T/C]cactctgagttgctggtagagctg
ASB in cell types
ICN12 (primary pre-B acute lymphomablastic leukemia)
ASB for transcription factors
PBX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX1_HUMAN 3.11 n/a 1.8·10-51.00 1.50 0.17 Weak Discordant
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Motif analysis

PBX1_HUMAN Weak Discordant
PBX1_HUMAN pic

Genetic associations

GRASP alzheimers disease,  schizophrenia,  total cholesterol change with statins

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