rs3741782 chr12:108701361 A>G

Sequence
gtgagaattatgttagaattatgc[A/G]ccaaactgaaagctttacttttac
ASB in cell types
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.07 0.82 1.002.6·10-6 2.02
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Motif analysis

No data available

Genetic associations

EMBL-EBI coronary artery disease and ldl cholesterol levels (multivariate analysis)
GRASP coronary artery disease (cad),  ldl cholesterol,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Frontal_Cortex_BA9,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Liver,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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