rs3742021 chr12:109445312 T>C
- Sequence
actgaatgtgctcatttgatctca[T/C]ggtaactacagaaacatgtaagtt
- ASB in cell types
- tibial nerve
- ASB for transcription factors
- EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.67 | -1.55 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, hdl cholesterol, parkinsons disease, total cholesterol, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid