rs3743111 chr15:71295034 G>A

Sequence
ccaagattggggtgggtgagtggc[G/A]cttgcgtcagggaatgtgagtgcc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PKNX1_HUMAN BCL3_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN n/a 3.50 1.005.7·10-10 2.00 1.73 Weak Concordant
BCL3_HUMAN 1.30 0.61 0.040.88 1.00 n/a n/a
RAD21_HUMAN 0.57 1.03 0.860.05 1.00 n/a n/a
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Motif analysis

PKNX1_HUMAN Weak Concordant
PKNX1_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  hdl cholesterol change with statins
GTEx eQTL Artery_Aorta,  Esophagus_Gastroesophageal_Junction,  Muscle_Skeletal

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