rs3743347 chr15:67254963 C>A
- Sequence
ttaatccaggtgggaaacgggctt[C/A]ccccggccctgccctgcccagccg
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- MED26_HUMAN GCR_HUMAN ANDR_HUMAN MZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MED26_HUMAN | 1.93 | -0.63 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | 1.02 | 0.58 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.81 | -0.10 | 2.00 | n/a | No Hit | |||
| MZF1_HUMAN | -2.75 | 2.65 | 1.00 | n/a | No Hit | |||
| GABP1_HUMAN | -2.49 | 2.34 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Uterus, Vagina, Whole_Blood