rs3743500 chr15:73633441 A>C

Sequence
ggctgaggagcgaccgccgcaagg[A/C]tcgcgagaagaggcggctccgacg
ASB in cell types
thymus-derived CD34- cells CD14+ monocytes
ASB for transcription factors
HTF4_HUMAN MNT_HUMAN BC11B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HTF4_HUMAN 2.47 n/a 0.021.00 1.00 n/a No Hit
MNT_HUMAN 1.69 -0.29 0.041.00 1.00 n/a No Hit
BC11B_HUMAN -1.42 2.45 1.000.05 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse,  Heart_Atrial_Appendage,  Liver,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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