rs3743976 chr16:10944967 C>T
- Sequence
gagtcagggcgcctgggttcgaac[C/T]ctgaccccgtcgctcttggctgtg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR2C1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | n/a | 2.99 | 2.00 | 2.08 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Liver, Lung, Small_Intestine_Terminal_Ileum, Testis, Thyroid