rs3744223 chr17:21214276 C>A
- Sequence
tcggcaggcggaagccagacccgg[C/A]ggaactaccgtgcccacaaggcag
- ASB in cell types
- HepG2 (hepatoblastoma) macrophages form periferal blood iPS-derived dermal fibroblasts fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- RBM25_HUMAN TYY1_HUMAN NELFE_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | -0.59 | 2.98 | 2.00 | n/a | n/a | |||
| TYY1_HUMAN | 0.59 | 2.32 | 1.23 | n/a | No Hit | |||
| NELFE_HUMAN | -0.14 | 1.42 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid