rs3744251 chr17:7857665 G>A
- Sequence
tggctcactgaagcgtactacgcc[G/A]gatgtcttaagatatcgcgagacc
- ASB in cell types
- 22RV1 (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line) macrophages form periferal blood CD14+ monocytes
- ASB for transcription factors
- ANDR_HUMAN GABPA_HUMAN STAT1_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.79 | n/a | 2.00 | n/a | No Hit | |||
| GABPA_HUMAN | 1.73 | n/a | 1.50 | n/a | No Hit | |||
| STAT1_HUMAN | 2.24 | n/a | 3.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.16 | 0.16 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, age at menarche, college completion, infant head circumference, rheumatoid arthritis, years of education
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Ovary, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Whole_Blood