rs3744626 chr17:29584539 A>G

Sequence
ctaggccccttgggagacagctgc[A/G]tacgactcaggctgcggaaaggtc
ASB in cell types
brain prefrontal cortex region tissues
ASB for transcription factors
OLIG2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OLIG2_HUMAN 2.14 -1.81 0.041.00 1.00 0.70 Weak Discordant
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Motif analysis

OLIG2_HUMAN Weak Discordant
OLIG2_HUMAN pic

Genetic associations

GRASP ldl cholesterol,  rheumatoid arthritis
GTEx eQTL Artery_Aorta,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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