rs3744768 chr17:1897592 G>A

Sequence
ctcacaacttgggttcttctcagc[G/A]gggcgagctgagaagcggtcatga
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PAX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PAX2_HUMAN -3.86 2.73 1.004.3·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension),  refractive error,  triglycerides
GTEx eQTL Artery_Aorta,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Hippocampus,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Pituitary

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