rs3745200 chr19:40376579 C>G

Sequence
gtggacacagccgccctctgcatc[C/G]tgccccacctcctatacacccgtc
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -1.69 2.15 1.000.04 1.00 -1.12 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  college completion,  fasting blood glucose,  fasting insulin,  homa-ir,  serum creatinine
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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