rs3745299 chr19:49155133 T>C

Sequence
gctgttgttccggtttctgaagcc[T/C]agcccatcccctctgagctgctgg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
GABP1_HUMAN SP130_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GABP1_HUMAN -2.06 2.46 1.002.9·10-3 1.00 n/a n/a
SP130_HUMAN -1.61 2.18 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Lung,  Muscle_Skeletal,  Pituitary,  Spleen,  Testis,  Whole_Blood

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