rs3745946 chr19:38206414 G>A
- Sequence
agggctgtgagtcagggtcagcgc[G/A]cacagccctcatgccccagagggc
- ASB in cell types
- MDA-MB-231ERb(triple negative breast cancer)
- ASB for transcription factors
- ESR2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR2_HUMAN | 2.84 | -5.17 | 2.00 | 1.45 | Weak Discordant |
Items per page:
1 – 1 of 1
Motif analysis
Genetic associations
GRASP comorbid depressive syndrome and alcohol dependence, ldl cholesterol, microalbuminuria, neuroblastoma (brain cancer), urinary albumin-to-creatinine ratio
GTEx eQTL Adrenal_Gland, Artery_Aorta, Brain_Caudate_basal_ganglia, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Testis, Whole_Blood